Serialized Form


Package edu.umass.cs.mallet.base.classify.evaluate

Class edu.umass.cs.mallet.base.classify.evaluate.Graph extends java.awt.Canvas implements Serializable

Serialized Fields

top

int top

bottom

int bottom

left

int left

right

int right

titleHeight

int titleHeight

labelWidth

int labelWidth

fm

java.awt.FontMetrics fm

padding

int padding

title

java.lang.String title

xLabel

java.lang.String xLabel

yLabel

java.lang.String yLabel

xLabelHeight

int xLabelHeight

yLabelWidth

int yLabelWidth

min

int min

max

int max

xmin

int xmin

xmax

int xmax

legend

Graph.Legend legend

items

java.util.Vector items

Class edu.umass.cs.mallet.base.classify.evaluate.Graph2 extends Graph implements Serializable

Serialized Fields

increment

int increment

position

int position


Package edu.umass.cs.mallet.base.classify

Class edu.umass.cs.mallet.base.classify.AdaBoostM2 extends Classifier implements Serializable

serialVersionUID: 1l

Serialized Fields

weakClassifiers

Classifier[] weakClassifiers

alphas

double[] alphas

Class edu.umass.cs.mallet.base.classify.BalancedWinnow extends Classifier implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

m_weights

double[][] m_weights

Class edu.umass.cs.mallet.base.classify.BalancedWinnowTrainer extends ClassifierTrainer implements Serializable

serialVersionUID: 1l

Serialized Fields

m_epsilon

double m_epsilon

m_delta

double m_delta

m_maxIterations

int m_maxIterations

m_coolingRate

double m_coolingRate

m_weights

double[][] m_weights
Array of weights, one for each class and feature, initialized to 1. For each class, there is an additional default "feature" weight that is set to 1 in every example (it remains constant; this is used to prevent the instance from having 0 dot product with a class).

Class edu.umass.cs.mallet.base.classify.C45 extends Classifier implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

m_root

C45.Node m_root

Class edu.umass.cs.mallet.base.classify.C45.Node extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialized Fields

m_gainRatio

GainRatio m_gainRatio

m_ilist

InstanceList m_ilist

m_instIndices

int[] m_instIndices

m_dataDict

Alphabet m_dataDict

m_minNumInsts

int m_minNumInsts

m_parent

C45.Node m_parent

m_leftChild

C45.Node m_leftChild

m_rightChild

C45.Node m_rightChild

Class edu.umass.cs.mallet.base.classify.DecisionTree extends Classifier implements Serializable

serialVersionUID: 1l

Serialized Fields

root

DecisionTree.Node root

addFeaturesClassEntropyThreshold

double addFeaturesClassEntropyThreshold

Class edu.umass.cs.mallet.base.classify.DecisionTree.Node extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialized Fields

featureIndex

int featureIndex

infoGain

double infoGain

ilist

InstanceList ilist

dictionary

Alphabet dictionary

labelEntropy

double labelEntropy

labeling

Labeling labeling

parent

DecisionTree.Node parent

child0

DecisionTree.Node child0

child1

DecisionTree.Node child1

name

java.lang.String name

Class edu.umass.cs.mallet.base.classify.MaxEnt extends Classifier implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

parameters

double[] parameters

defaultFeatureIndex

int defaultFeatureIndex

featureSelection

FeatureSelection featureSelection

perClassFeatureSelection

FeatureSelection[] perClassFeatureSelection

Class edu.umass.cs.mallet.base.classify.MaxEntTrainer extends ClassifierTrainer implements Serializable

Serialized Fields

numGetValueCalls

int numGetValueCalls

numGetValueGradientCalls

int numGetValueGradientCalls

numIterations

int numIterations

usingMultiConditionalTraining

boolean usingMultiConditionalTraining

usingHyperbolicPrior

boolean usingHyperbolicPrior

gaussianPriorVariance

double gaussianPriorVariance

hyperbolicPriorSlope

double hyperbolicPriorSlope

hyperbolicPriorSharpness

double hyperbolicPriorSharpness

maximizerClass

java.lang.Class maximizerClass

Class edu.umass.cs.mallet.base.classify.MCMaxEnt extends Classifier implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

parameters

double[] parameters

defaultFeatureIndex

int defaultFeatureIndex

featureSelection

FeatureSelection featureSelection

perClassFeatureSelection

FeatureSelection[] perClassFeatureSelection

Class edu.umass.cs.mallet.base.classify.MCMaxEntTrainer extends ClassifierTrainer implements Serializable

Serialized Fields

numGetValueCalls

int numGetValueCalls

numGetValueGradientCalls

int numGetValueGradientCalls

numIterations

int numIterations

usingMultiConditionalTraining

boolean usingMultiConditionalTraining

usingHyperbolicPrior

boolean usingHyperbolicPrior

gaussianPriorVariance

double gaussianPriorVariance

hyperbolicPriorSlope

double hyperbolicPriorSlope

hyperbolicPriorSharpness

double hyperbolicPriorSharpness

maximizerClass

java.lang.Class maximizerClass

generativeWeighting

double generativeWeighting

Class edu.umass.cs.mallet.base.classify.NaiveBayes extends Classifier implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prior

Multinomial.Logged prior

p

Multinomial.Logged[] p

Class edu.umass.cs.mallet.base.classify.NaiveBayesTrainer extends IncrementalClassifierTrainer implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

featureEstimator

Multinomial.Estimator featureEstimator

priorEstimator

Multinomial.Estimator priorEstimator

me

Multinomial.Estimator[] me

pe

Multinomial.Estimator pe

instancePipe

Pipe instancePipe

dataAlphabet

Alphabet dataAlphabet

targetAlphabet

Alphabet targetAlphabet


Package edu.umass.cs.mallet.base.extract.pipe

Class edu.umass.cs.mallet.base.extract.pipe.TokenSequence2Tokenization extends Pipe implements Serializable


Package edu.umass.cs.mallet.base.extract

Class edu.umass.cs.mallet.base.extract.BIOTokenizationFilter extends java.lang.Object implements Serializable

serialVersionUID: -8726127297313150023l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.extract.ConfidenceTokenizationFilter extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

confidenceEstimator

ExtractionConfidenceEstimator confidenceEstimator

underlyingFilter

TokenizationFilter underlyingFilter

Class edu.umass.cs.mallet.base.extract.CRFExtractor extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

crf

CRF4 crf

tokenizationPipe

Pipe tokenizationPipe

featurePipe

Pipe featurePipe

backgroundTag

java.lang.String backgroundTag

filter

TokenizationFilter filter

Class edu.umass.cs.mallet.base.extract.DefaultTokenizationFilter extends java.lang.Object implements Serializable

Class edu.umass.cs.mallet.base.extract.LabeledSpans extends ArrayListSequence implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

document

java.lang.Object document

Class edu.umass.cs.mallet.base.extract.StringSpan extends Token implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

document

java.lang.CharSequence document

start

int start

end

int end

Class edu.umass.cs.mallet.base.extract.StringTokenization extends TokenSequence implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

document

java.lang.CharSequence document

Class edu.umass.cs.mallet.base.extract.TransducerExtractionConfidenceEstimator extends ExtractionConfidenceEstimator implements Serializable

Serialized Fields

confidenceEstimator

TransducerConfidenceEstimator confidenceEstimator

featurePipe

Pipe featurePipe


Package edu.umass.cs.mallet.base.fst.confidence

Class edu.umass.cs.mallet.base.fst.confidence.ConstrainedForwardBackwardConfidenceEstimator extends TransducerConfidenceEstimator implements Serializable

Class edu.umass.cs.mallet.base.fst.confidence.GammaAverageConfidenceEstimator extends TransducerConfidenceEstimator implements Serializable

Serialized Fields

string2stateIndex

java.util.HashMap string2stateIndex

Class edu.umass.cs.mallet.base.fst.confidence.GammaProductConfidenceEstimator extends TransducerConfidenceEstimator implements Serializable

Serialized Fields

string2stateIndex

java.util.HashMap string2stateIndex

Class edu.umass.cs.mallet.base.fst.confidence.MaxEntConfidenceEstimator extends TransducerConfidenceEstimator implements Serializable

Serialized Fields

meTrainer

MaxEntTrainer meTrainer

meClassifier

MaxEnt meClassifier

pipe

Pipe pipe

correct

java.lang.String correct

incorrect

java.lang.String incorrect

Class edu.umass.cs.mallet.base.fst.confidence.RandomConfidenceEstimator extends TransducerConfidenceEstimator implements Serializable

Serialized Fields

generator

java.util.Random generator

Class edu.umass.cs.mallet.base.fst.confidence.TransducerConfidenceEstimator extends java.lang.Object implements Serializable

Serialized Fields

model

Transducer model

segmentConfidences

java.util.Vector segmentConfidences


Package edu.umass.cs.mallet.base.fst

Class edu.umass.cs.mallet.base.fst.CRF extends Transducer implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

inputAlphabet

Alphabet inputAlphabet

outputAlphabet

Alphabet outputAlphabet

states

java.util.ArrayList states

initialStates

java.util.ArrayList initialStates

name2state

java.util.HashMap name2state

weights

DenseVector[] weights

constraints

DenseVector[] constraints

expectations

DenseVector[] expectations

weightAlphabet

Alphabet weightAlphabet

trainable

boolean trainable

gatheringConstraints

boolean gatheringConstraints

defaultFeatureIndex

int defaultFeatureIndex

usingHyperbolicPrior

boolean usingHyperbolicPrior

gaussianPriorVariance

double gaussianPriorVariance

hyperbolicPriorSlope

double hyperbolicPriorSlope

hyperbolicPriorSharpness

double hyperbolicPriorSharpness

cachedCostStale

boolean cachedCostStale

cachedGradientStale

boolean cachedGradientStale

featureSelections

FeatureSelection[] featureSelections

printGradient

boolean printGradient

Class edu.umass.cs.mallet.base.fst.CRF_PL extends CRF4 implements Serializable

Serialized Fields

dumpProbabilities

boolean dumpProbabilities

gatheringTrainingData

boolean gatheringTrainingData

trainingGatheredFor

InstanceList trainingGatheredFor

trainingSets

java.util.List[][] trainingSets

startingInstances

java.util.List startingInstances

endingInstances

java.util.List endingInstances

normalizeCosts

boolean normalizeCosts

inum

int inum

numOriginalStates

int numOriginalStates

originalStateNames

Alphabet originalStateNames

Class edu.umass.cs.mallet.base.fst.CRF_PL.MaximizableCRF_PL extends CRF4.MaximizableCRF implements Serializable

Class edu.umass.cs.mallet.base.fst.CRF_PL.State extends CRF4.State implements Serializable

Serialized Fields

prevWeightsIndices

int[][] prevWeightsIndices

Class edu.umass.cs.mallet.base.fst.CRF_PL.TransitionIterator extends CRF4.TransitionIterator implements Serializable

Serialized Fields

fv0

FeatureVector fv0

fv1

FeatureVector fv1

ip

int ip

isStart

boolean isStart

isLast

boolean isLast

Class edu.umass.cs.mallet.base.fst.CRF.MinimizableCRF extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

trainingSet

InstanceList trainingSet

cachedCost

double cachedCost

cachedGradient

DenseVector cachedGradient

infiniteCosts

java.util.BitSet infiniteCosts

numParameters

int numParameters

crf

CRF crf

Class edu.umass.cs.mallet.base.fst.CRF.State extends Transducer.State implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

initialConstraint

double initialConstraint

initialExpectation

double initialExpectation

finalConstraint

double finalConstraint

finalExpectation

double finalExpectation

name

java.lang.String name

index

int index

destinationNames

java.lang.String[] destinationNames

destinations

CRF.State[] destinations

weightsIndices

int[] weightsIndices

labels

java.lang.String[] labels

crf

CRF crf

Class edu.umass.cs.mallet.base.fst.CRF.TransitionIterator extends Transducer.TransitionIterator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

source

CRF.State source

index

int index

nextIndex

int nextIndex

costs

double[] costs

input

FeatureVector input

crf

CRF crf

Class edu.umass.cs.mallet.base.fst.CRF2 extends Transducer implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

inputAlphabet

Alphabet inputAlphabet

outputAlphabet

Alphabet outputAlphabet

states

java.util.ArrayList states

initialStates

java.util.ArrayList initialStates

name2state

java.util.HashMap name2state

weights

SparseVector[] weights

constraints

SparseVector[] constraints

expectations

SparseVector[] expectations

defaultWeights

double[] defaultWeights

defaultConstraints

double[] defaultConstraints

defaultExpectations

double[] defaultExpectations

weightsPresent

java.util.BitSet[] weightsPresent

weightAlphabet

Alphabet weightAlphabet

trainable

boolean trainable

gatheringConstraints

boolean gatheringConstraints

gatheringWeightsPresent

boolean gatheringWeightsPresent

usingHyperbolicPrior

boolean usingHyperbolicPrior

gaussianPriorVariance

double gaussianPriorVariance

hyperbolicPriorSlope

double hyperbolicPriorSlope

hyperbolicPriorSharpness

double hyperbolicPriorSharpness

cachedCostStale

boolean cachedCostStale

cachedGradientStale

boolean cachedGradientStale

printGradient

boolean printGradient

Class edu.umass.cs.mallet.base.fst.CRF2.MinimizableCRF extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

trainingSet

InstanceList trainingSet

cachedCost

double cachedCost

cachedGradient

DenseVector cachedGradient

infiniteCosts

java.util.BitSet infiniteCosts

numParameters

int numParameters

crf

CRF2 crf

Class edu.umass.cs.mallet.base.fst.CRF2.State extends Transducer.State implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

initialConstraint

double initialConstraint

initialExpectation

double initialExpectation

finalConstraint

double finalConstraint

finalExpectation

double finalExpectation

name

java.lang.String name

index

int index

destinationNames

java.lang.String[] destinationNames

destinations

CRF2.State[] destinations

weightsIndices

int[] weightsIndices

labels

java.lang.String[] labels

crf

CRF2 crf

Class edu.umass.cs.mallet.base.fst.CRF2.TransitionIterator extends Transducer.TransitionIterator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

source

CRF2.State source

index

int index

nextIndex

int nextIndex

costs

double[] costs

input

FeatureVector input

crf

CRF2 crf

Class edu.umass.cs.mallet.base.fst.CRF3 extends Transducer implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

inputAlphabet

Alphabet inputAlphabet

outputAlphabet

Alphabet outputAlphabet

states

java.util.ArrayList states

initialStates

java.util.ArrayList initialStates

name2state

java.util.HashMap name2state

weights

SparseVector[] weights

constraints

SparseVector[] constraints

expectations

SparseVector[] expectations

defaultWeights

double[] defaultWeights

defaultConstraints

double[] defaultConstraints

defaultExpectations

double[] defaultExpectations

weightsPresent

java.util.BitSet[] weightsPresent

globalFeatureSelection

FeatureSelection globalFeatureSelection

featureSelections

FeatureSelection[] featureSelections

weightAlphabet

Alphabet weightAlphabet

trainable

boolean trainable

gatheringConstraints

boolean gatheringConstraints

gatheringWeightsPresent

boolean gatheringWeightsPresent

usingHyperbolicPrior

boolean usingHyperbolicPrior

gaussianPriorVariance

double gaussianPriorVariance

hyperbolicPriorSlope

double hyperbolicPriorSlope

hyperbolicPriorSharpness

double hyperbolicPriorSharpness

cachedCostStale

boolean cachedCostStale

cachedGradientStale

boolean cachedGradientStale

someTrainingDone

boolean someTrainingDone

featureInducers

java.util.ArrayList featureInducers

priorInitialCost

double[] priorInitialCost

priorFinalCost

double[] priorFinalCost

printGradient

boolean printGradient

Class edu.umass.cs.mallet.base.fst.CRF3.MinimizableCRF extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

trainingSet

InstanceList trainingSet

cachedCost

double cachedCost

cachedGradient

DenseVector cachedGradient

infiniteCosts

java.util.BitSet infiniteCosts

numParameters

int numParameters

crf

CRF3 crf

Class edu.umass.cs.mallet.base.fst.CRF3.State extends Transducer.State implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

initialConstraint

double initialConstraint

initialExpectation

double initialExpectation

finalConstraint

double finalConstraint

finalExpectation

double finalExpectation

name

java.lang.String name

index

int index

destinationNames

java.lang.String[] destinationNames

destinations

CRF3.State[] destinations

weightsIndices

int[][] weightsIndices

labels

java.lang.String[] labels

crf

CRF3 crf

Class edu.umass.cs.mallet.base.fst.CRF3.TransitionIterator extends Transducer.TransitionIterator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

source

CRF3.State source

index

int index

nextIndex

int nextIndex

costs

double[] costs

input

FeatureVector input

crf

CRF3 crf

Class edu.umass.cs.mallet.base.fst.CRF4 extends Transducer implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

inputAlphabet

Alphabet inputAlphabet

outputAlphabet

Alphabet outputAlphabet

states

java.util.ArrayList states

initialStates

java.util.ArrayList initialStates

name2state

java.util.HashMap name2state

weights

SparseVector[] weights

constraints

SparseVector[] constraints

expectations

SparseVector[] expectations

defaultWeights

double[] defaultWeights

defaultConstraints

double[] defaultConstraints

defaultExpectations

double[] defaultExpectations

weightsPresent

java.util.BitSet[] weightsPresent

globalFeatureSelection

FeatureSelection globalFeatureSelection

featureSelections

FeatureSelection[] featureSelections

weightsFrozen

boolean[] weightsFrozen

weightAlphabet

Alphabet weightAlphabet

trainable

boolean trainable

gatheringConstraints

boolean gatheringConstraints

gatheringWeightsPresent

boolean gatheringWeightsPresent

usingHyperbolicPrior

boolean usingHyperbolicPrior

gaussianPriorVariance

double gaussianPriorVariance

hyperbolicPriorSlope

double hyperbolicPriorSlope

hyperbolicPriorSharpness

double hyperbolicPriorSharpness

useSparseWeights

boolean useSparseWeights

cachedValueStale

boolean cachedValueStale

cachedGradientStale

boolean cachedGradientStale

someTrainingDone

boolean someTrainingDone

transductionType

int transductionType

featureInducers

java.util.ArrayList featureInducers

printGradient

boolean printGradient

Class edu.umass.cs.mallet.base.fst.CRF4.MaximizableCRF extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

trainingSet

InstanceList trainingSet

cachedValue

double cachedValue

cachedGradient

DenseVector cachedGradient

infiniteValues

java.util.BitSet infiniteValues

numParameters

int numParameters

crf

CRF4 crf

Class edu.umass.cs.mallet.base.fst.CRF4.State extends Transducer.State implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

initialConstraint

double initialConstraint

initialExpectation

double initialExpectation

finalConstraint

double finalConstraint

finalExpectation

double finalExpectation

name

java.lang.String name

index

int index

destinationNames

java.lang.String[] destinationNames

destinations

CRF4.State[] destinations

weightsIndices

int[][] weightsIndices

labels

java.lang.String[] labels

crf

CRF4 crf

Class edu.umass.cs.mallet.base.fst.CRF4.TransitionIterator extends Transducer.TransitionIterator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

source

CRF4.State source

index

int index

nextIndex

int nextIndex

costs

double[] costs

input

FeatureVector input

crf

CRF4 crf

Class edu.umass.cs.mallet.base.fst.CRFByGISUpdate extends Transducer implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

inputAlphabet

Alphabet inputAlphabet

outputAlphabet

Alphabet outputAlphabet

states

java.util.ArrayList states

initialStates

java.util.ArrayList initialStates

name2state

java.util.HashMap name2state

weights

SparseVector[] weights

constraints

SparseVector[] constraints

expectations

SparseVector[] expectations

defaultWeights

double[] defaultWeights

defaultConstraints

double[] defaultConstraints

defaultExpectations

double[] defaultExpectations

weightsPresent

java.util.BitSet[] weightsPresent

globalFeatureSelection

FeatureSelection globalFeatureSelection

featureSelections

FeatureSelection[] featureSelections

weightAlphabet

Alphabet weightAlphabet

trainable

boolean trainable

gatheringConstraints

boolean gatheringConstraints

gatheringWeightsPresent

boolean gatheringWeightsPresent

usingHyperbolicPrior

boolean usingHyperbolicPrior

gaussianPriorVariance

double gaussianPriorVariance

hyperbolicPriorSlope

double hyperbolicPriorSlope

hyperbolicPriorSharpness

double hyperbolicPriorSharpness

cachedCostStale

boolean cachedCostStale

cachedGISUpdateStale

boolean cachedGISUpdateStale

someTrainingDone

boolean someTrainingDone

featureInducers

java.util.ArrayList featureInducers

printGradient

boolean printGradient

Class edu.umass.cs.mallet.base.fst.CRFByGISUpdate.MinimizableCRF extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

trainingSet

InstanceList trainingSet

cachedCost

double cachedCost

cachedGISUpdate

DenseVector cachedGISUpdate

infiniteCosts

java.util.BitSet infiniteCosts

numParameters

int numParameters

crf

CRFByGISUpdate crf

updatedGIS

int updatedGIS

maxCount

double maxCount

Class edu.umass.cs.mallet.base.fst.CRFByGISUpdate.State extends Transducer.State implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

initialConstraint

double initialConstraint

initialExpectation

double initialExpectation

finalConstraint

double finalConstraint

finalExpectation

double finalExpectation

name

java.lang.String name

index

int index

destinationNames

java.lang.String[] destinationNames

destinations

CRFByGISUpdate.State[] destinations

weightsIndices

int[][] weightsIndices

labels

java.lang.String[] labels

crf

CRFByGISUpdate crf

Class edu.umass.cs.mallet.base.fst.CRFByGISUpdate.TransitionIterator extends Transducer.TransitionIterator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

source

CRFByGISUpdate.State source

index

int index

nextIndex

int nextIndex

costs

double[] costs

input

FeatureVector input

crf

CRFByGISUpdate crf

Class edu.umass.cs.mallet.base.fst.FeatureTransducer extends Transducer implements Serializable

Serialized Fields

inputAlphabet

Alphabet inputAlphabet

outputAlphabet

Alphabet outputAlphabet

states

java.util.ArrayList states

initialStates

java.util.ArrayList initialStates

name2state

java.util.HashMap name2state

initialStateCounts

Multinomial.Estimator initialStateCounts

finalStateCounts

Multinomial.Estimator finalStateCounts

trainable

boolean trainable

Class edu.umass.cs.mallet.base.fst.FeatureTransducer.State extends Transducer.State implements Serializable

Serialized Fields

name

java.lang.String name

index

int index

transitions

FeatureTransducer.Transition[] transitions

input2transitions

gnu.trove.TIntObjectHashMap input2transitions

transitionCounts

Multinomial.Estimator transitionCounts

Class edu.umass.cs.mallet.base.fst.FeatureTransducer.TransitionIterator extends Transducer.TransitionIterator implements Serializable

Serialized Fields

index

int index

transition

FeatureTransducer.Transition transition

source

FeatureTransducer.State source

input

int input

Class edu.umass.cs.mallet.base.fst.HMM extends Transducer implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

inputAlphabet

Alphabet inputAlphabet

outputAlphabet

Alphabet outputAlphabet

states

java.util.ArrayList states

initialStates

java.util.ArrayList initialStates

name2state

java.util.HashMap name2state

transitionEstimator

Multinomial.Estimator[] transitionEstimator

emissionEstimator

Multinomial.Estimator[] emissionEstimator

initialEstimator

Multinomial.Estimator initialEstimator

transitionMultinomial

Multinomial[] transitionMultinomial

emissionMultinomial

Multinomial[] emissionMultinomial

initialMultinomial

Multinomial initialMultinomial

trainable

boolean trainable

Class edu.umass.cs.mallet.base.fst.HMM.State extends Transducer.State implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

name

java.lang.String name

index

int index

destinationNames

java.lang.String[] destinationNames

destinations

HMM.State[] destinations

labels

java.lang.String[] labels

hmm

HMM hmm

Class edu.umass.cs.mallet.base.fst.HMM.TransitionIterator extends Transducer.TransitionIterator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

source

HMM.State source

index

int index

nextIndex

int nextIndex

inputPos

int inputPos

costs

double[] costs

input

FeatureSequence input

hmm

HMM hmm

Class edu.umass.cs.mallet.base.fst.MEMM extends CRF4 implements Serializable

Serialized Fields

gatheringTrainingData

boolean gatheringTrainingData

trainingGatheredFor

InstanceList trainingGatheredFor

Class edu.umass.cs.mallet.base.fst.MEMM.MaximizableMEMM extends CRF4.MaximizableCRF implements Serializable

Class edu.umass.cs.mallet.base.fst.MEMM.State extends CRF4.State implements Serializable

Serialized Fields

trainingSet

InstanceList trainingSet

Class edu.umass.cs.mallet.base.fst.MEMM.TransitionIterator extends CRF4.TransitionIterator implements Serializable

Serialized Fields

sum

double sum

Class edu.umass.cs.mallet.base.fst.SimpleTagger.SimpleTaggerSentence2FeatureVectorSequence extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.fst.Transducer extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

UseForwardBackwardBeam

boolean UseForwardBackwardBeam

beamWidth

int beamWidth

KLeps

double KLeps

Rmin

double Rmin

nstatesExpl

double[] nstatesExpl

curIter

int curIter

tctIter

int tctIter

curAvgNstatesExpl

double curAvgNstatesExpl

inputPipe

Pipe inputPipe
A pipe that should produce a Sequence in the "data" slot, (and possibly one in the "target" slot also


outputPipe

Pipe outputPipe
A pipe that should expect a ViterbiPath in the "target" slot, and should produce something printable in the "source" slot that indicates the results of transduction.

Class edu.umass.cs.mallet.base.fst.Transducer.State extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

initialCost

double initialCost

finalCost

double finalCost

Class edu.umass.cs.mallet.base.fst.Transducer.TransitionIterator extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException


Package edu.umass.cs.mallet.base.fst.tests

Class edu.umass.cs.mallet.base.fst.tests.TestCRF.TestCRF2String extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestCRF.TestCRFTokenSequenceRemoveSpaces extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestCRF2.TestCRF2String extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestCRF2.TestCRFTokenSequenceRemoveSpaces extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestCRF3.TestCRF2String extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestCRF3.TestCRFTokenSequenceRemoveSpaces extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestCRF4.TestCRF2String extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestCRF4.TestCRFTokenSequenceRemoveSpaces extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestMEMM.TestMEMM2String extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.fst.tests.TestMEMM.TestMEMMTokenSequenceRemoveSpaces extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException


Package edu.umass.cs.mallet.base.maximize

Class edu.umass.cs.mallet.base.maximize.MaximizeException extends java.lang.RuntimeException implements Serializable


Package edu.umass.cs.mallet.base.pipe

Class edu.umass.cs.mallet.base.pipe.AddClassifierTokenPredictions extends Pipe implements Serializable

serialVersionUID: 1l

Serialized Fields

m_predRanks2add

int[] m_predRanks2add

m_tokenClassifiers

AddClassifierTokenPredictions.TokenClassifiers m_tokenClassifiers

m_binary

boolean m_binary

m_inProduction

boolean m_inProduction

m_dataAlphabet

Alphabet m_dataAlphabet

Class edu.umass.cs.mallet.base.pipe.AddClassifierTokenPredictions.TokenClassifiers extends Classifier implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

m_numCV

int m_numCV

m_randSeed

int m_randSeed

m_trainer

ClassifierTrainer m_trainer

m_tokenClassifier

Classifier m_tokenClassifier

m_table

java.util.HashMap m_table

Class edu.umass.cs.mallet.base.pipe.Array2FeatureVector extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.pipe.AugmentableFeatureVectorAddConjunctions extends Pipe implements Serializable

Serialized Fields

conjunctions

FeatureConjunction.List conjunctions

Class edu.umass.cs.mallet.base.pipe.AugmentableFeatureVectorLogScale extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.pipe.CharSequence2CharNGrams extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

n

int n

distinguishBorders

boolean distinguishBorders

Class edu.umass.cs.mallet.base.pipe.CharSequence2TokenSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

lexer

CharSequenceLexer lexer

Class edu.umass.cs.mallet.base.pipe.CharSequenceArray2TokenSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.CharSequenceReplace extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

regex

java.util.regex.Pattern regex

replacement

java.lang.String replacement

Class edu.umass.cs.mallet.base.pipe.CharSubsequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

regex

java.util.regex.Pattern regex

groupIndex

int groupIndex

Class edu.umass.cs.mallet.base.pipe.Classification2ConfidencePredictingFeatureVector extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.pipe.Csv2Array extends Pipe implements Serializable

Serialized Fields

lexer

CharSequenceLexer lexer

numberFeatures

int numberFeatures

Class edu.umass.cs.mallet.base.pipe.Csv2FeatureVector extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.pipe.Directory2FileIterator extends Pipe implements Serializable

Serialized Fields

fileFilter

java.io.FileFilter fileFilter

labelPattern

java.util.regex.Pattern labelPattern

Class edu.umass.cs.mallet.base.pipe.FeatureSequence2AugmentableFeatureVector extends Pipe implements Serializable

Serialized Fields

binary

boolean binary

Class edu.umass.cs.mallet.base.pipe.FeatureSequence2FeatureVector extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

binary

boolean binary

Class edu.umass.cs.mallet.base.pipe.FeatureValueString2FeatureVector extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.pipe.FeatureVectorConjunctions extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.Filename2CharSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.Input2CharSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.InstanceListTrimFeaturesByCount extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

minCount

int minCount

Class edu.umass.cs.mallet.base.pipe.IteratingPipe extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

iteratedPipe

Pipe iteratedPipe

accumulator

PipeOutputAccumulator accumulator

Class edu.umass.cs.mallet.base.pipe.LineGroupString2TokenSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

lexer

CharSequenceLexer lexer

Class edu.umass.cs.mallet.base.pipe.MakeAmpersandXMLFriendly extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.Noop extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.ParallelPipes extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

pipes

java.util.ArrayList pipes

accumulator

PipeOutputAccumulator accumulator

Class edu.umass.cs.mallet.base.pipe.Pipe extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

readResolve

public java.lang.Object readResolve()
                             throws java.io.ObjectStreamException
This gets called after readObject; it lets the object decide whether to return itself or return a previously read in version. We use a hashMap of instanceIds to determine if we have already read in this object.

Throws:
java.io.ObjectStreamException
Serialized Fields

parent

Pipe parent

dataDict

Alphabet dataDict

targetDict

Alphabet targetDict

dataDictClass

java.lang.Class dataDictClass

targetDictClass

java.lang.Class targetDictClass

dataAlphabetResolved

boolean dataAlphabetResolved

targetAlphabetResolved

boolean targetAlphabetResolved

targetProcessing

boolean targetProcessing

instanceId

java.rmi.dgc.VMID instanceId

Class edu.umass.cs.mallet.base.pipe.PipeException extends java.lang.Exception implements Serializable

Class edu.umass.cs.mallet.base.pipe.PipeOutputArrayList extends java.util.ArrayList implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.PrintInput extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prefix

java.lang.String prefix

stream

java.io.PrintStream stream

Class edu.umass.cs.mallet.base.pipe.PrintInputAndTarget extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prefix

java.lang.String prefix

Class edu.umass.cs.mallet.base.pipe.PrintTokenSequenceFeatures extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prefix

java.lang.String prefix

Class edu.umass.cs.mallet.base.pipe.SaveDataInSource extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.SelectiveSGML2TokenSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

sgmlPattern

java.util.regex.Pattern sgmlPattern

lexer

CharSequenceLexer lexer

backgroundTag

java.lang.String backgroundTag

allowedTags

java.util.Set allowedTags

Class edu.umass.cs.mallet.base.pipe.SerialPipes extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

pipes

java.util.ArrayList pipes

Class edu.umass.cs.mallet.base.pipe.SGML2TokenSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

sgmlPattern

java.util.regex.Pattern sgmlPattern

lexer

CharSequenceLexer lexer

backgroundTag

java.lang.String backgroundTag

saveSource

boolean saveSource

Class edu.umass.cs.mallet.base.pipe.SimpleTaggerSentence2TokenSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

setTokensAsFeatures

boolean setTokensAsFeatures

Class edu.umass.cs.mallet.base.pipe.SourceLocation2TokenSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

lexer

CharSequenceLexer lexer

Class edu.umass.cs.mallet.base.pipe.StringAddNewLineDelimiter extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

delim

java.lang.String delim

Class edu.umass.cs.mallet.base.pipe.Target2FeatureSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.Target2Label extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.pipe.Target2LabelSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.TargetRememberLastLabel extends Pipe implements Serializable

Serialized Fields

backgroundLabel

java.lang.String backgroundLabel

offset

boolean offset

Class edu.umass.cs.mallet.base.pipe.Token2FeatureVector extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

augmentable

boolean augmentable

binary

boolean binary

Class edu.umass.cs.mallet.base.pipe.TokenSequence2FeatureSequence extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.pipe.TokenSequence2FeatureSequenceWithBigrams extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

biDictionary

Alphabet biDictionary

Class edu.umass.cs.mallet.base.pipe.TokenSequence2FeatureVectorSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

augmentable

boolean augmentable

binary

boolean binary

growAlphabet

boolean growAlphabet

Class edu.umass.cs.mallet.base.pipe.TokenSequence2TokenIterator extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.TokenSequenceLowercase extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.pipe.TokenSequenceMatchDataAndTarget extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

regex

java.util.regex.Pattern regex

dataGroup

int dataGroup

targetGroup

int targetGroup

Class edu.umass.cs.mallet.base.pipe.TokenSequenceNGrams extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

gramSizes

int[] gramSizes

Class edu.umass.cs.mallet.base.pipe.TokenSequenceParseFeatureString extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

realValued

boolean realValued

specifyFeatureNames

boolean specifyFeatureNames

nameValueSeparator

java.lang.String nameValueSeparator

Class edu.umass.cs.mallet.base.pipe.TokenSequenceRemoveNonAlpha extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

markDeletions

boolean markDeletions

Class edu.umass.cs.mallet.base.pipe.TokenSequenceRemoveStopwords extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

caseSensitive

boolean caseSensitive

markDeletions

boolean markDeletions


Package edu.umass.cs.mallet.base.pipe.tests

Class edu.umass.cs.mallet.base.pipe.tests.TestInstancePipe.Array2ArrayIterator extends Pipe implements Serializable

Class edu.umass.cs.mallet.base.pipe.tests.TestSGML2TokenSequence.Array2ArrayIterator extends Pipe implements Serializable


Package edu.umass.cs.mallet.base.pipe.tsf

Class edu.umass.cs.mallet.base.pipe.tsf.CountMatches extends Pipe implements Serializable

Serialized Fields

regex

java.util.regex.Pattern regex

feature

java.lang.String feature

normalizeByCharLength

boolean normalizeByCharLength

countIsBinary

boolean countIsBinary

Class edu.umass.cs.mallet.base.pipe.tsf.CountMatchesAlignedWithOffsets extends Pipe implements Serializable

Serialized Fields

regex

java.util.regex.Pattern regex

feature

java.lang.String feature

offsets

int[] offsets

normalizeByMatchCount

boolean normalizeByMatchCount

Class edu.umass.cs.mallet.base.pipe.tsf.CountMatchesMatching extends Pipe implements Serializable

Serialized Fields

feature

java.lang.String feature

regex

java.util.regex.Pattern regex

moreSpecificRegex

java.util.regex.Pattern moreSpecificRegex

normalizeByRegexMatches

boolean normalizeByRegexMatches

Class edu.umass.cs.mallet.base.pipe.tsf.FeaturesInWindow extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

namePrefix

java.lang.String namePrefix

namePrefixLeft

java.lang.String namePrefixLeft

leftBoundary

int leftBoundary

rightBoundary

int rightBoundary

featureRegex

java.util.regex.Pattern featureRegex

includeBeginEndBoundaries

boolean includeBeginEndBoundaries

includeCurrentToken

boolean includeCurrentToken

Class edu.umass.cs.mallet.base.pipe.tsf.FeaturesOfFirstMention extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

namePrefix

java.lang.String namePrefix

firstMentionName

java.lang.String firstMentionName

featureRegex

java.util.regex.Pattern featureRegex

filterRegex

java.util.regex.Pattern filterRegex

includeFiltered

boolean includeFiltered

Class edu.umass.cs.mallet.base.pipe.tsf.LexiconMembership extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

name

java.lang.String name

lexicon

gnu.trove.THashSet lexicon

ignoreCase

boolean ignoreCase

Class edu.umass.cs.mallet.base.pipe.tsf.OffsetConjunctions extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

conjunctions

int[][] conjunctions

includeOriginalSingletons

boolean includeOriginalSingletons

featureRegex

java.util.regex.Pattern featureRegex

Class edu.umass.cs.mallet.base.pipe.tsf.OffsetFeatureConjunction extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

thisFeatureName

java.lang.String thisFeatureName

featurePatterns

java.util.regex.Pattern[] featurePatterns

offsets

int[] offsets

isNonNegated

boolean[] isNonNegated

tagAllTimesteps

boolean tagAllTimesteps

Class edu.umass.cs.mallet.base.pipe.tsf.OffsetPropertyConjunctions extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

conjunctions

int[][] conjunctions

includeOriginalSingletons

boolean includeOriginalSingletons

propertyKey

java.lang.String propertyKey

Class edu.umass.cs.mallet.base.pipe.tsf.RegexMatches extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

regex

java.util.regex.Pattern regex

feature

java.lang.String feature

Class edu.umass.cs.mallet.base.pipe.tsf.SequencePrintingPipe extends Pipe implements Serializable

Serialized Fields

writer

java.io.PrintWriter writer

Class edu.umass.cs.mallet.base.pipe.tsf.Target2BIOFormat extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

backgroundTag

java.lang.String backgroundTag

Class edu.umass.cs.mallet.base.pipe.tsf.TokenText extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prefix

java.lang.String prefix

Class edu.umass.cs.mallet.base.pipe.tsf.TokenTextCharNGrams extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prefix

java.lang.String prefix

gramSizes

int[] gramSizes

distinguishBorders

boolean distinguishBorders

Class edu.umass.cs.mallet.base.pipe.tsf.TokenTextCharPrefix extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prefix

java.lang.String prefix

prefixLength

int prefixLength

Class edu.umass.cs.mallet.base.pipe.tsf.TokenTextCharSuffix extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prefix

java.lang.String prefix

suffixLength

int suffixLength

Class edu.umass.cs.mallet.base.pipe.tsf.TokenTextNGrams extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prefix

java.lang.String prefix

gramSizes

int[] gramSizes

distinguishBorders

boolean distinguishBorders

Class edu.umass.cs.mallet.base.pipe.tsf.TrieLexiconMembership extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

name

java.lang.String name

ignoreCase

boolean ignoreCase

lexicon

edu.umass.cs.mallet.base.pipe.tsf.TrieLexiconMembership.TrieLexicon lexicon


Package edu.umass.cs.mallet.base.types

Class edu.umass.cs.mallet.base.types.Alphabet extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

readResolve

public java.lang.Object readResolve()
                             throws java.io.ObjectStreamException
This gets called after readObject; it lets the object decide whether to return itself or return a previously read in version. We use a hashMap of instanceIds to determine if we have already read in this object.

Throws:
java.io.ObjectStreamException
Serialized Fields

map

gnu.trove.TObjectIntHashMap map

entries

java.util.ArrayList entries

growthStopped

boolean growthStopped

entryClass

java.lang.Class entryClass

instanceId

java.rmi.dgc.VMID instanceId

Class edu.umass.cs.mallet.base.types.ArrayListSequence extends java.util.ArrayList implements Serializable

Class edu.umass.cs.mallet.base.types.AugmentableFeatureVector extends FeatureVector implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

size

int size

maxSortedIndex

int maxSortedIndex

Class edu.umass.cs.mallet.base.types.DenseFeatureVector extends DenseVector implements Serializable

Serialized Fields

dictionary

Alphabet dictionary

Class edu.umass.cs.mallet.base.types.DenseMatrix extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

values

double[] values

hasInfinite

boolean hasInfinite

Class edu.umass.cs.mallet.base.types.DenseVector extends DenseMatrix implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.types.ExpGain extends RankedFeatureVector implements Serializable

Serialized Fields

usingHyperbolicPrior

boolean usingHyperbolicPrior

hyperbolicSlope

double hyperbolicSlope

hyperbolicSharpness

double hyperbolicSharpness

Class edu.umass.cs.mallet.base.types.FeatureConjunction extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

name

java.lang.String name

dictionary

Alphabet dictionary

features

int[] features

negations

boolean[] negations

index

int index

Class edu.umass.cs.mallet.base.types.FeatureConjunction.List extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

conjunctions

java.util.ArrayList conjunctions

Class edu.umass.cs.mallet.base.types.FeatureCounts extends RankedFeatureVector implements Serializable

Class edu.umass.cs.mallet.base.types.FeatureInducer extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

ranker

RankedFeatureVector.Factory ranker

perLabelRanker

RankedFeatureVector.PerLabelFactory perLabelRanker

beam1

int beam1

beam2

int beam2

fcl

FeatureConjunction.List fcl

Class edu.umass.cs.mallet.base.types.FeatureSelection extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

dictionary

Alphabet dictionary

selectedFeatures

java.util.BitSet selectedFeatures

Class edu.umass.cs.mallet.base.types.FeatureSequence extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

dictionary

Alphabet dictionary

features

int[] features

length

int length

Class edu.umass.cs.mallet.base.types.FeatureSequenceWithBigrams extends FeatureSequence implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

biDictionary

Alphabet biDictionary

biFeatures

int[] biFeatures

Class edu.umass.cs.mallet.base.types.FeatureVector extends SparseVector implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

dictionary

Alphabet dictionary

Class edu.umass.cs.mallet.base.types.FeatureVectorSequence extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

sequence

FeatureVector[] sequence

Class edu.umass.cs.mallet.base.types.GainRatio extends RankedFeatureVector implements Serializable

serialVersionUID: 1l

Serialized Fields

m_splitPoints

double[] m_splitPoints

m_baseEntropy

double m_baseEntropy

m_baseLabelDistribution

LabelVector m_baseLabelDistribution

m_numSplitPointsForBestFeature

int m_numSplitPointsForBestFeature

m_minNumInsts

int m_minNumInsts

Class edu.umass.cs.mallet.base.types.GradientGain extends RankedFeatureVector implements Serializable

Class edu.umass.cs.mallet.base.types.HashedSparseVector extends SparseVector implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

index2location

gnu.trove.TIntIntHashMap index2location

maxIndex

int maxIndex

Class edu.umass.cs.mallet.base.types.IndexedSparseVector extends SparseVector implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.types.InfoGain extends RankedFeatureVector implements Serializable

Serialized Fields

baseEntropy

double baseEntropy

baseLabelDistribution

LabelVector baseLabelDistribution

Class edu.umass.cs.mallet.base.types.Instance extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

data

java.lang.Object data

target

java.lang.Object target

name

java.lang.Object name

source

java.lang.Object source

pipe

Pipe pipe

properties

PropertyList properties

locked

boolean locked

Class edu.umass.cs.mallet.base.types.InstanceList extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

instances

java.util.ArrayList instances

instanceWeights

DoubleList instanceWeights

featureSelection

FeatureSelection featureSelection

perLabelFeatureSelection

FeatureSelection[] perLabelFeatureSelection

pipe

Pipe pipe

dataVocab

Alphabet dataVocab

targetVocab

Alphabet targetVocab

dataClass

java.lang.Class dataClass

targetClass

java.lang.Class targetClass

Class edu.umass.cs.mallet.base.types.InstanceList.CrossValidationIterator extends java.lang.Object implements Serializable

Serialized Fields

nfolds

int nfolds

folds

InstanceList[] folds

index

int index

Class edu.umass.cs.mallet.base.types.InstanceList.Iterator extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

index

int index

Class edu.umass.cs.mallet.base.types.KLGain extends RankedFeatureVector implements Serializable

Class edu.umass.cs.mallet.base.types.Label extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

entry

java.lang.Object entry

dictionary

LabelAlphabet dictionary

index

int index

Class edu.umass.cs.mallet.base.types.LabelAlphabet extends Alphabet implements Serializable

Serialized Fields

labels

java.util.ArrayList labels

Class edu.umass.cs.mallet.base.types.Labels extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

labels

Label[] labels

Class edu.umass.cs.mallet.base.types.LabelSequence extends FeatureSequence implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.types.LabelsSequence extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

seq

Labels[] seq

Class edu.umass.cs.mallet.base.types.LabelVector extends RankedFeatureVector implements Serializable

Class edu.umass.cs.mallet.base.types.Matrix2 extends DenseMatrix implements Serializable

Serialized Fields

nr

int nr

nc

int nc

Class edu.umass.cs.mallet.base.types.Matrixn extends DenseMatrix implements Serializable

Serialized Fields

numDimensions

int numDimensions

sizes

int[] sizes

Class edu.umass.cs.mallet.base.types.Multinomial extends FeatureVector implements Serializable

serialVersionUID: 1l

Class edu.umass.cs.mallet.base.types.Multinomial.Estimator extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

dictionary

Alphabet dictionary

counts

double[] counts

size

int size

Class edu.umass.cs.mallet.base.types.Multinomial.LaplaceEstimator extends Multinomial.MEstimator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.types.Multinomial.Logged extends Multinomial implements Serializable

serialVersionUID: 1l

Class edu.umass.cs.mallet.base.types.Multinomial.MAPEstimator extends Multinomial.Estimator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

prior

Dirichlet prior

Class edu.umass.cs.mallet.base.types.Multinomial.MEstimator extends Multinomial.Estimator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

m

double m

Class edu.umass.cs.mallet.base.types.Multinomial.MLEstimator extends Multinomial.MEstimator implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException

Class edu.umass.cs.mallet.base.types.PagedInstanceList extends InstanceList implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

instancesPerPage

int instancesPerPage
number of instances to put in one page. if -1, determine at first call to swapOutExcept


swapDir

java.io.File swapDir
directory to store swap files


inMemory

java.util.BitSet inMemory
inMemory.get(i) == true iff instances.get(i) is in memory, else 0


pageNotInMemory

java.util.BitSet pageNotInMemory
pageNotInMemory.get(i) == true iff page i is not in memory, else 0


collectGarbage

boolean collectGarbage
recommend garbage collection after every swap out?


id

java.rmi.dgc.VMID id
uniquely identifies this InstanceList. Used in creating serialized page name for swap files.

Class edu.umass.cs.mallet.base.types.PartiallyRankedFeatureVector extends RankedFeatureVector implements Serializable

Serialized Fields

numRanked

int numRanked

Class edu.umass.cs.mallet.base.types.RankedFeatureVector extends FeatureVector implements Serializable

Serialized Fields

rankOrder

int[] rankOrder

sortedTo

int sortedTo

Class edu.umass.cs.mallet.base.types.SparseMatrixn extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

values

SparseVector values

numDimensions

int numDimensions

sizes

int[] sizes

singleSize

int singleSize

Class edu.umass.cs.mallet.base.types.SparseVector extends java.lang.Object implements Serializable

serialVersionUID: 2l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

indices

int[] indices
If the vector is sparse, then both indices and values are sparse. Indices into these arrays are called ``locations'' in the below. The indices[] array maps locations to indices of the (virtual) dense array that's being represented. value[] maps locations to values.


values

double[] values

hasInfinite

boolean hasInfinite

Class edu.umass.cs.mallet.base.types.StringEditFeatureVectorSequence extends FeatureVectorSequence implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

string1Length

int string1Length

string2Length

int string2Length

string1

java.lang.String string1

string2

java.lang.String string2

string1Blocks

java.lang.String[] string1Blocks

string2Blocks

java.lang.String[] string2Blocks

string1Present

gnu.trove.TObjectIntHashMap string1Present

string2Present

gnu.trove.TObjectIntHashMap string2Present

lexicon

gnu.trove.TObjectIntHashMap lexicon

block1Indices

int[] block1Indices

block2Indices

int[] block2Indices

delim

char delim

Class edu.umass.cs.mallet.base.types.StringEditVector extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

_delimiter

java.lang.String _delimiter

_string1

java.lang.String _string1

_string2

java.lang.String _string2

_match

int _match

Class edu.umass.cs.mallet.base.types.StringKernel extends java.util.LinkedHashMap implements Serializable

Serialized Fields

normalizeCase

boolean normalizeCase

lambda

double lambda

n

int n

cache

boolean cache

Class edu.umass.cs.mallet.base.types.Token extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

text

java.lang.String text

properties

PropertyList properties

features

PropertyList features

Class edu.umass.cs.mallet.base.types.TokenSequence extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

tokens

java.util.ArrayList tokens

properties

PropertyList properties


Package edu.umass.cs.mallet.base.util

Class edu.umass.cs.mallet.base.util.CharSequenceLexer extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

regex

java.util.regex.Pattern regex

matcher

java.util.regex.Matcher matcher

input

java.lang.CharSequence input

matchText

java.lang.String matchText

matchTextFresh

boolean matchTextFresh

Class edu.umass.cs.mallet.base.util.DoubleList extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

data

double[] data

size

int size

Class edu.umass.cs.mallet.base.util.ProgressMessageLogRecord extends java.util.logging.LogRecord implements Serializable

Class edu.umass.cs.mallet.base.util.PropertyList extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

next

PropertyList next

key

java.lang.String key

Class edu.umass.cs.mallet.base.util.PropertyList.Iterator extends java.lang.Object implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

property

PropertyList property

nextProperty

PropertyList nextProperty

deletedKeys

java.util.HashSet deletedKeys

nextCalled

boolean nextCalled

returnNumeric

boolean returnNumeric

returnObject

boolean returnObject

Class edu.umass.cs.mallet.base.util.PropertyList.NumericIterator extends PropertyList.Iterator implements Serializable

Class edu.umass.cs.mallet.base.util.PropertyList.ObjectIterator extends PropertyList.Iterator implements Serializable

Class edu.umass.cs.mallet.base.util.Random extends java.lang.Object implements Serializable

serialVersionUID: 3905348978240129619l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

mt

int[] mt

mti

int mti

mag01

int[] mag01

nextGaussian

double nextGaussian

haveNextGaussian

boolean haveNextGaussian


Package edu.umass.cs.mallet.share.casutton.ner

Class edu.umass.cs.mallet.share.casutton.ner.ConllNer2003Sentence2TokenSequence extends Pipe implements Serializable

Serialized Fields

saveSource

boolean saveSource

doConjunctions

boolean doConjunctions

doTags

boolean doTags

doPhrases

boolean doPhrases

doSpelling

boolean doSpelling

doDigitCollapses

boolean doDigitCollapses

doDowncasing

boolean doDowncasing


Package edu.umass.cs.mallet.share.mccallum.ner

Class edu.umass.cs.mallet.share.mccallum.ner.ConllNer2003Sentence2TokenSequence extends Pipe implements Serializable

Serialized Fields

saveSource

boolean saveSource

doConjunctions

boolean doConjunctions

doTags

boolean doTags

doPhrases

boolean doPhrases

doSpelling

boolean doSpelling

doDigitCollapses

boolean doDigitCollapses

doDowncasing

boolean doDowncasing

Class edu.umass.cs.mallet.share.mccallum.ner.TokenSequenceDocHeader extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException


Package edu.umass.cs.mallet.share.upenn.ner

Class edu.umass.cs.mallet.share.upenn.ner.FeatureWindow extends Pipe implements Serializable

Serialized Fields

left

int left

right

int right

Class edu.umass.cs.mallet.share.upenn.ner.LengthBins extends Pipe implements Serializable

Serialized Fields

name

java.lang.String name

bins

int[] bins

binNames

java.lang.String[] binNames

Class edu.umass.cs.mallet.share.upenn.ner.ListMember extends Pipe implements Serializable

Serialized Fields

name

java.lang.String name

lexicon

java.util.Set lexicon

ignoreCase

boolean ignoreCase

min

int min

max

int max

Class edu.umass.cs.mallet.share.upenn.ner.LongRegexMatches extends Pipe implements Serializable

Serialized Fields

name

java.lang.String name

regex

java.util.regex.Pattern regex

min

int min

max

int max

Class edu.umass.cs.mallet.share.upenn.ner.NEPipes extends SerialPipes implements Serializable


Package edu.umass.cs.mallet.share.weili.ner.enron

Class edu.umass.cs.mallet.share.weili.ner.enron.EnronMessage2TokenSequence extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

saveSource

boolean saveSource

headerPersonNames

java.util.HashSet headerPersonNames


Package edu.umass.cs.mallet.projects.seg_plus_coref.anaphora

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.AceTypeFeature extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.AcronymOf extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.AffixOfMentionPair extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.GenderMentionPair extends Pipe implements Serializable

Serialized Fields

femaleMap

java.util.HashMap femaleMap

maleMap

java.util.HashMap maleMap

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.HobbsDistanceMentionPair extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.LinearDistanceMentionPair extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.MentionPair2FeatureVector extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.MentionPair2FeatureVectorFilter extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.MentionPairAntecedentPosition extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.MentionPairHeadIdentical extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.MentionPairIdentical extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.MentionPairNPDistance extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.MentionPairSentenceDistance extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.MentionPairSubstring extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.ModifierWordFeatures extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.NullAntecedentFeatureExtractor extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.PartOfSpeechMentionPair extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.anaphora.TokenFeaturesMentionPair extends Pipe implements Serializable


Package edu.umass.cs.mallet.projects.seg_plus_coref.clustering

Class edu.umass.cs.mallet.projects.seg_plus_coref.clustering.CitationCluster extends java.util.LinkedList implements Serializable

Serialized Fields

canonicalObj

java.lang.Object canonicalObj

refNoMeta

java.lang.String refNoMeta

clusterNoMeta

java.lang.String clusterNoMeta

startTags

java.lang.String[] startTags

endTags

java.lang.String[] endTags

tagWeight

double[] tagWeight

Class edu.umass.cs.mallet.projects.seg_plus_coref.clustering.Cluster extends java.util.LinkedHashSet implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.clustering.Clustering extends java.util.LinkedHashSet implements Serializable

Serialized Fields

selectVertices

java.util.List selectVertices

Class edu.umass.cs.mallet.projects.seg_plus_coref.clustering.GraphClustering extends Clustering implements Serializable

Serialized Fields

graph

salvo.jesus.graph.WeightedGraph graph

verticesToClusters

java.util.HashMap verticesToClusters

Class edu.umass.cs.mallet.projects.seg_plus_coref.clustering.KeyCluster extends Cluster implements Serializable

Serialized Fields

clusterId

java.lang.String clusterId

Class edu.umass.cs.mallet.projects.seg_plus_coref.clustering.KeyClustering extends Clustering implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.clustering.MortonClustering extends Clustering implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.clustering.SGML2FieldsPipe extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

sgmlRegex

java.lang.String sgmlRegex

sgmlPattern

java.util.regex.Pattern sgmlPattern

lexer

CharSequenceLexer lexer

lexerRegex

java.lang.String lexerRegex

backgroundTag

java.lang.String backgroundTag

refNoMeta

java.lang.String refNoMeta

clusterNoMeta

java.lang.String clusterNoMeta

clusterNoMeta_true

java.lang.String clusterNoMeta_true

startTags

java.lang.String[] startTags

endTags

java.lang.String[] endTags

tagWeight

double[] tagWeight

Source

java.lang.String Source

TEXT_NO_TAG

java.lang.String TEXT_NO_TAG


Package edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.AllLinks extends Pipe implements Serializable

Serialized Fields

classifier

Classifier classifier
Determines distance between two nodes


includePairwiseFeatures

boolean includePairwiseFeatures
True if we should include the features from the closest/farthest NodePair


minNumNeg

int minNumNeg
How many negative links we need to see b/t node and cluster for feature to fire

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.AverageLink extends Pipe implements Serializable

Serialized Fields

classifier

Classifier classifier

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.ClosestSingleLink extends Pipe implements Serializable

Serialized Fields

classifier

Classifier classifier
Determines distance between two nodes


includePairwiseFeatures

boolean includePairwiseFeatures
True if we should include the features from the closest NodePair

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.ClusterHomogeneity extends Pipe implements Serializable

Serialized Fields

classifier

Classifier classifier

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.ClusterSize extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.FarthestSingleLink extends Pipe implements Serializable

Serialized Fields

classifier

Classifier classifier

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.ForAll extends Pipe implements Serializable

Serialized Fields

fields

java.lang.String[] fields

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.NNegativeNodes extends Pipe implements Serializable

Serialized Fields

classifier

Classifier classifier
Determines distance between two nodes


n

int n
number of negative nodes we must see for this feature to fire

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.NodeClusterPair2FeatureVector extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.PaperClusterPrediction extends Pipe implements Serializable

Serialized Fields

classifier

Classifier classifier

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.ThereExists extends Pipe implements Serializable

Serialized Fields

fields

java.lang.String[] fields

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.ThereExistsMatch extends Pipe implements Serializable

Serialized Fields

distanceMeasure

com.wcohen.secondstring.StringDistance distanceMeasure

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.VenueClusterPrediction extends Pipe implements Serializable

Serialized Fields

classifier

Classifier classifier

Class edu.umass.cs.mallet.projects.seg_plus_coref.condclust.pipe.VenuePaperCluster2FeatureVector extends Pipe implements Serializable


Package edu.umass.cs.mallet.projects.seg_plus_coref.coreference

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.AuthorLastNameEqual extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.AuthorPipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.BooktitlePipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

threshold

double threshold

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.DatePipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

threshold

double threshold

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.ExactFieldMatchPipe extends Pipe implements Serializable

Serialized Fields

fields

java.lang.String[] fields

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.FieldStringDistancePipe extends Pipe implements Serializable

Serialized Fields

distanceMeasure

com.wcohen.secondstring.StringDistance distanceMeasure

fields

java.lang.String[] fields

featureName

java.lang.String featureName

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.FuchunPipe extends Pipe implements Serializable

Serialized Fields

default_Max_Dist

double default_Max_Dist

default_Ignore_Dist

double default_Ignore_Dist

distMetric

com.wcohen.secondstring.StringDistance distMetric

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.GlobalPipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

useNBest

boolean useNBest

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.GlobalPipeUnSeg extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

useNBest

boolean useNBest

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.HeuristicPipe extends Pipe implements Serializable

Serialized Fields

fields

java.lang.String[] fields

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.InterFieldPipe extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.JournalPipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

threshold

double threshold

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.NodePair2FeatureVector extends Pipe implements Serializable

Serialized Fields

binary

boolean binary

augmentable

boolean augmentable

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.NodePairSaveSource extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.NormalizationPipe extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

startTags

java.lang.String[] startTags

endTags

java.lang.String[] endTags

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.PageMatchPipe extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.PagesPipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

threshold

double threshold

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.PlainFieldPipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

distMetric2

com.wcohen.secondstring.StringDistance distMetric2

threshold

double threshold

useNBest

boolean useNBest

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.PublisherPipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

threshold

double threshold

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.RegexPipe extends Pipe implements Serializable

Serialized Fields

fields

java.lang.String[] fields

regex

java.lang.String regex

featureName

java.lang.String featureName

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.SGMLStringDistances extends Pipe implements Serializable

Serialized Fields

nw

com.wcohen.secondstring.AbstractStringDistance nw

sgmlStartTags

java.lang.String[] sgmlStartTags

sgmlEndTags

java.lang.String[] sgmlEndTags

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.SplitFieldStringDistancePipe extends Pipe implements Serializable

Serialized Fields

distanceMeasure

com.wcohen.secondstring.StringDistance distanceMeasure

fields

java.lang.String[] fields

featureName

java.lang.String featureName

splitPattern

java.lang.String splitPattern

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.StringDistances extends Pipe implements Serializable

Serialized Fields

nw

com.wcohen.secondstring.AbstractStringDistance nw

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.TechPipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

threshold

double threshold

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.TitlePipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

threshold

double threshold

useNBest

boolean useNBest

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.VenueAcronymPipe extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.VenuePipe extends Pipe implements Serializable

Serialized Fields

distMetric

com.wcohen.secondstring.StringDistance distMetric

threshold

double threshold

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.VolumesMatchPipe extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.YearPipe extends Pipe implements Serializable

Class edu.umass.cs.mallet.projects.seg_plus_coref.coreference.YearsWithinFivePipe extends Pipe implements Serializable


Package edu.umass.cs.mallet.projects.seg_plus_coref.graphs

Class edu.umass.cs.mallet.projects.seg_plus_coref.graphs.Test1 extends javax.swing.JFrame implements Serializable

Serialized Fields

v1

salvo.jesus.graph.Vertex v1

v2

salvo.jesus.graph.Vertex v2

v3

salvo.jesus.graph.Vertex v3

e1

salvo.jesus.graph.Edge e1

e2

salvo.jesus.graph.Edge e2

e3

salvo.jesus.graph.Edge e3

graph

salvo.jesus.graph.Graph graph

gedit1

salvo.jesus.graph.visual.GraphEditor gedit1

gedit2

salvo.jesus.graph.visual.GraphEditor gedit2


Package edu.umass.cs.mallet.projects.seg_plus_coref.ie

Class edu.umass.cs.mallet.projects.seg_plus_coref.ie.POSFeaturesPipe extends Pipe implements Serializable

serialVersionUID: 1l

Serialization Methods

readObject

private void readObject(java.io.ObjectInputStream in)
                 throws java.io.IOException,
                        java.lang.ClassNotFoundException

writeObject

private void writeObject(java.io.ObjectOutputStream out)
                  throws java.io.IOException
Serialized Fields

POSModelFile

java.lang.String POSModelFile

doTag

boolean doTag

doTagBigram

boolean doTagBigram

doTagTrigram

boolean doTagTrigram

doTagWord

boolean doTagWord

POS_On

boolean POS_On

posExtracter

IEInterface3 posExtracter

Class edu.umass.cs.mallet.projects.seg_plus_coref.ie.TUI_CorefIE.BogusClusterPipe extends Pipe implements Serializable

Serialized Fields

segmentation

TUI_CorefIE.AllClusterSegmentation segmentation

Class edu.umass.cs.mallet.projects.seg_plus_coref.ie.TUI_CorefIE.NegativeClusterFeaturePipe extends Pipe implements Serializable

Serialized Fields

segmentation

TUI_CorefIE.AllClusterSegmentation segmentation

Class edu.umass.cs.mallet.projects.seg_plus_coref.ie.TUI_CorefIE.NumAppearancesInClusterPipe extends Pipe implements Serializable

Serialized Fields

segmentation

TUI_CorefIE.AllClusterSegmentation segmentation

Class edu.umass.cs.mallet.projects.seg_plus_coref.ie.TUI_CorefIE.WordAppearsInAnyClusterPipe extends Pipe implements Serializable

Serialized Fields

segmentation

TUI_CorefIE.AllClusterSegmentation segmentation

Class edu.umass.cs.mallet.projects.seg_plus_coref.ie.TUI_CorefIE.WordOftenAppearsAsPipe extends Pipe implements Serializable

Serialized Fields

segmentation

TUI_CorefIE.AllClusterSegmentation segmentation